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 Transcription factor Multiplate

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Marligen's Transcription Factor Microplate Assays
Marligen’s Chemiluminescent Transcription Factor Microplate Assays allow researchers to quantitate the DNA binding activity of transcription factors in nuclear extracts prepared from cultured cells and are designed to be used in combination with Marligen’s Nuclear Extraction Kit to ensure optimal performance. Transcription factors are DNA-binding proteins that regulate gene expression through the activity of two distinct domains. One domain displays high affinity for a specific DNA sequence and the other interacts with coactivators, corepressors and/or the basal transcriptional machinery that transcribes genes. Transcription factors are activated by a variety of mechanisms including ligand binding, phosphorylation, and interactions with other proteins involved in the regulation of transcription.  Marligen’s Chemiluminescent Transcription Factor Microplate Assays are intended for use in studying the mechanisms of gene regulation and in analyzing signaling pathways important in cellular functions such as development, differentiation, control of cell division and death, etc. Marligen’s Chemiluminescent Transcription Factor Microplate Assays can be used in drug discovery applications including disease characterization, target validation, compound screening, and toxicity testing. Marligen’s rapidly expanding line of products for studying gene regulation also includes Multiplex Transcription Factor Assay Kits and Testing Services, Nuclear Extraction Kits and Reagents for Studying Gene Regulation (including activators, inhibitors, purified proteins and antibodies).

 

Advantages:
Up to 100-fold more sensitive than gelshift assays
Eliminates radioactivity and the use of gels
Broadest menu of chemiluminescent assays 
Superior sensitivity minimizes amount of nuclear extracts required
Results in less than four hours
Compatible with standard plate luminometers
Accommodates both high and low throughput experiments
Direct quantitation of binding activity without the need for antibodies.

 

Technology

Standard methods for studying transcription factors and gene regulation include gelshifts, western blot and reporter gene assays, which are time-consuming, do not allow for high-throughput and provide only semi-quantitative results. Marligen’s Chemiluminescent Transcription Factor Microplate Assays employ a proprietary assay technology and chemiluminescent detection that offers superior sensitivity, broad dynamic range and excellent reproducibility compared with traditional methods or with commercially available transcription factor ELISAs. The assays do not require the use of radioactivity, and results can be obtained in under four hours. The convenient stripwell format enables testing of from one to 96 samples in each plate, and the chemiluminescent signal is measured with standard 96-well plate luminometers. 

Marligen’s assays measure the binding of activated transcription factors to their cognate DNA binding sequences. First, nuclear extracts prepared from control or experimental cells or tissues are incubated with a biotin-labeled DNA probe containing the appropriate binding sequence and a single-stranded capture sequence subsequently used to immobilize the complex. A reagent is added to digest DNA probes that have not bound transcription factors, which dissociates the capture sequence from the biotin label unless the complex has been protected by the interaction of the DNA probe and activated transcription factors. Probes containing bound transcription factors are then captured onto the surface of the microplate, unbound label is washed away, and bound probes are detected using a streptavidin-alkaline phosphatase conjugate and a chemiluminescent substrate. The amount of signal generated is proportional to the amount of transcription factor in the nuclear extract that has bound to the labeled probe. A schematic of the assay is shown in Figure 1.

 


 
Figure 1: Summary of protocol for Marligen’s Chemiluminescent Transcription Factor NF-κB Microplate Assay.
 

Features and Benefits

bulletDetects Activation in Small Samples

 
Figure 2 : NFκB activation was observed in less than 0.1 μg of nuclear extract from TNF-α stimulated HeLa cells.
bulletDetects Multiple Transcription Factor Complexes

 
Figure 3: Marligen’s Chemiluminescent AP-1 Microplate Assay detects both c-jun homodimers and c-jun-c-fos heterdimers, obviating the need for specific antibodies to multiple protein forms or splice variants. 
bulletCorrelates with Marligen’s Multiplex Transcription Factor Assays. 
Figure 4A

Figure 4B

 

Figure 4: Changes in the activity of multiple transcription factors are observed when 10 μg of nuclear extract from PMA treated cells are tested on Marligen’s 20-plex assay (Figure 4A). Single Analyte Chemiluminescent assays require less sample and can be used to further characterize individual responses, Figure 4B shows data from PPAR assay.
Related Products

Nuclear Extraction Kit
Reagents and protocol optimized to provide gentle extraction of nuclear and cytoplasmic proteins to maintain transcription factor activity with minimal cross contamination. The kit provides sufficient materials to prepare extracts from 100 cell pellets of approximately 100 µl each (10 to 50 million cells on average) and can be scaled up or down accordingly. The extracts can be used for EMSAs, ELISAs and Western blots in addition to Marligen’s Multiplex and Microplate Transcription Factor Kits. See ordering information below.

Reagents for Studying Gene Regulations
Marligen is pleased to announce that it is introducing a range of biochemical and biological reagents used for studying transcription factors. They include purified transcription factor proteins, antibodies to transcription factors, inhibitors and activators of transcription factors, and nuclear extracts from untreated and treated cultured cells. Click here for more information.

 

Ordering Information :

Catalog No. Item Name Size
11942-096 AP-1 Transcription Factor Microplate Assay 96 reactions
11945-096 NFκB Transcription Factor Microplate Assay 96 reactions
11946-096 EGR Transcription Factor Microplate Assay 96 reactions
11947-096 NF-1 Transcription Factor Microplate Assay 96 reactions
11953-096 PPAR Transcription Factor Microplate Assay 96 reactions
11978-096 Myc-Max Transcription Factor Microplate Assay 96 reactions
11979-096 CREB Transcription Factor Microplate Assay 96 reactions
11980-096 GATA Transcription Factor Microplate Assay 96 reactions
11981-096 Octamer Transcription Factor Microplate Assay 96 reactions
11982-096 MEF-2 Transcription Factor Microplate Assay 96 reactions
11983-096 CRE-ATF Transcription Factor Microplate Assay 96 reactions
11906-100 Nuclear Extraction Kit 100 reactions
11941-100 Whole Cell Extraction Reagent 100 reactions
11934-001 Protein Control (NF-1/NFκB) 20 μg
60319 10X Wash Buffer for Transcription Factor Microplate Assays 100 ml

The menu of available transcription factor binding assays is being expanded rapidly. Please inquire to learn about the availability of new assays and to let us know which new assays you would like us to offer in future.

Product Literature:
AP-1 Transcription Factor Microplate Assay Package Insert
NFκB Transcription Factor Microplate Assay Package Insert
EGR Transcription Factor Microplate Assay Package Insert
NF-1 Transcription Factor Microplate Assay Package Insert
PPAR Transcription Factor Microplate Assay Package Insert
Myc-Max Transcription Factor Microplate Assay Package Insert
CREB Transcription Factor Microplate Assay Package Insert
GATA Transcription Factor Microplate Assay Package Insert
Octamer Transcription Factor Microplate Assay Package Insert
MEF-2 Transcription Factor Microplate Assay Package Insert
CRE-ATF Transcription Factor Microplate Assay Package Insert
Nuclear Extraction Kit
Whole Cell Extraction Reagent
Presentation on Marligen’s Transcription Factor Assay Technology

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